| ncRNA ID | zma-miR529-3p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr5:160574955-160575080 [+] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 105 - GCUGUACCCUCUCUCUUCUUC - 125 |
| Stem-loop(if miRNA) |
-- A - GC GUAC ----- A UC CUCU GAGAAGAGAGAG GUACAGCCUU GUU CAU ACACU CAG UA AACAGU U |||||||||||| |||||||||| ||| ||| ||||| ||| || |||||| A UUCUUCUCUCUC CAUGUCGGAA UAG GUG UGUGA GUC AU UUGUCG U UC C G UA -ACC UUAUU C CA UUUA |
| Stem-loop sequence | GAGAAGAGAGAGAGUACAGCCUUGUUGCCAUGUACACACUCAGAUAUCAACAGUCUCUUAUAUUUGCUGUUACUACCUGUUAUUAGUGUCCAGUGAUGAUGAAGGCUGUACCCUCUCUCUUCUUCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008674729.2 |
|
2.5 | PREDICTED: Zea mays 60S ribosomal protein L18A (LOC100284168), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_008674728.2 |
|
2.5 | PREDICTED: Zea mays 60S ribosomal protein L18A (LOC100284168), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| NM_001157064.1 |
|
2.5 | Zea mays 60S ribosomal protein L18A (LOC100284168), mRNA | NA | coding protein | psRNATarget | |||||||||
| EU967345.1 |
|
2.5 | Zea mays clone 301699 60S ribosomal protein L18A mRNA, complete cds | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |