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BaseInfo

ncRNA ID zma-miR399h-5p
Species Zea mays
Class miRNA
Genome position chr5:146894716-146894809 [+]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 2 - GUGCAGUUCUCCUCUGGCACG - 22
Stem-loop(if miRNA) --  U           C     -C   CCAA     -A -CA   U   C
  AG GCAGUUCUCCU UGGCA  GAA    GGCUG  G   GCU GCC C
  || ||||||||||| |||||  |||    |||||  |   ||| |||
  UC CGUUAAGAGGA ACCGU  CUU    CCGGC  C   CGA CGG A
CG  C           A     UC   ---C     AG ACC   U   U
Stem-loop sequence AGUGCAGUUCUCCUCUGGCACGAACCAAGGCUGAGCAGCUUGCCCCAUGGCUAGCCCACGACGGCCCUUCCUUGCCAAAGGAGAAUUGCCCUGC

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).