ncRNA ID | zma-miR399h-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr5:146894716-146894809 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 2 - GUGCAGUUCUCCUCUGGCACG - 22 |
Stem-loop(if miRNA) |
--  U           C     -C   CCAA     -A -CA   U   C   AG GCAGUUCUCCU UGGCA  GAA    GGCUG  G   GCU GCC C   || ||||||||||| |||||  |||    |||||  |   ||| |||   UC CGUUAAGAGGA ACCGU  CUU    CCGGC  C   CGA CGG A CG  C           A     UC   ---C     AG ACC   U   U |
Stem-loop sequence | AGUGCAGUUCUCCUCUGGCACGAACCAAGGCUGAGCAGCUUGCCCCAUGGCUAGCCCACGACGGCCCUUCCUUGCCAAAGGAGAAUUGCCCUGC |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |