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BaseInfo

ncRNA ID	ath-miRf10303-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GUGGUUGUUGUUCUACAGGG - NA
Stem-loop(if miRNA)	CUG    UU  G       G    U UG  UCA            UAAUC       CU A  U  GA    UAAA  UC UGUAGAA AAUG C  UA   CUUUAGGGUUUG     GAUUUGG  U CU GG  U    ||||  || ||||||| |||| |  ||   ||||||||||||     |||||||  | || ||    AUUU  GG ACAUCUU UUGU G  GU   GAAGUUUUAAAC     UUAGAUC  A GA UC  U GAA    -U  G       G    U GU  UUC            UUGUU       UU A  U  AU
Stem-loop sequence	CUGUAAAUUUCGUGUAGAAGAAUGUCUGUAUCACUUUAGGGUUUGUAAUCGAUUUGGCUUACUUGGGAUUUACUUAGAAUUCUAGAUUUUGUUCAAAUUUUGAAGCUUUGUGGUUGUUGUUCUACAGGGUUUUAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BX832945.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   |=|||||||||||||||||* targets:318   CUCUGUAGAACAACAACCAA   337 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL25ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK230112.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   |=|||||||||||||||||* targets:353   CUCUGUAGAACAACAACCAA   372 Target Full Sequence	2.0	Arabidopsis thaliana mRNA for serine protease-like protein, partial sequence., clone: RAFL22-78-H13	NA	coding protein	psRNATarget
BX833566.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   |=|||||||||||||||||* targets:711   CUCUGUAGAACAACAACCAA   730 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY080831.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   |=|||||||||||||||||* targets:2395   CUCUGUAGAACAACAACCAA   2414 Target Full Sequence	2.0	Arabidopsis thaliana putative subtilisin serine protease (At5g51750) mRNA, complete cds	NA	coding protein	psRNATarget
NM_124554.3	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   |=|||||||||||||||||* targets:2588   CUCUGUAGAACAACAACCAA   2607 Target Full Sequence	2.0	Arabidopsis thaliana subtilase 1.3 (SBT1.3), mRNA	subtilase 1.3(SBT1.3)	coding protein	psRNATarget
DQ446955.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   *||||*|||=|||||||||| targets:153   ACCUGCAGAGCAACAACCAC   172 Target Full Sequence	2.5	Arabidopsis thaliana clone pENTR221-At5g16500 protein kinase family protein (At5g16500) mRNA, complete cds	NA	coding protein	psRNATarget
BX829557.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   *||||*|||=|||||||||| targets:315   ACCUGCAGAGCAACAACCAC   334 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_121655.3	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   *||||*|||=|||||||||| targets:461   ACCUGCAGAGCAACAACCAC   480 Target Full Sequence	2.5	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT5G16500)	coding protein	psRNATarget
NM_001338333.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   =|||*|=||||||||||||= targets:175   UCCUAUGGAACAACAACCAU   194 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT3G18300)	coding protein	psRNATarget
NM_112715.2	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   =|||*|=||||||||||||= targets:1276   UCCUAUGGAACAACAACCAU   1295 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT3G18300)	coding protein	psRNATarget
AY600577.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   =|||*|=||||||||||||= targets:1276   UCCUAUGGAACAACAACCAU   1295 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (At3g18300) mRNA, complete cds, alternatively spliced	NA	coding protein	psRNATarget
AY600576.1	ncRNA:20   GGGACAUCUUGUUGUUGGUG   1   =|||*|=||||||||||||= targets:1476   UCCUAUGGAACAACAACCAU   1495 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (At3g18300) mRNA, complete cds, alternatively spliced	NA	coding protein	psRNATarget