| ncRNA ID | zma-miR160b-3p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr5:43021403-43021523 [-] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 19 - GCGUGCAAGGAGCCAAGCAUG - 39 |
| Stem-loop(if miRNA) |
C -- CG CG C C ACACAUGUAGCCA UG GA GAUC GGCU UGU UGUGUGC UGGCUCC UGUAUGCC ACCCG GCGU U |||| |||| ||| ||||||| ||||||| |||||||| ||||| |||| CUAG CCGG ACA ACGUACG ACCGAGG ACGUGCGG UGGGU CGUA U A UA -- AU A A ------------- GU GG |
| Stem-loop sequence | CGAUCGGCUCGUGUCGUGUGUGCCUGGCUCCCUGUAUGCCACACAUGUAGCCAACCCGUGGCGUGAUUGGAUGCUGUGGGUGGCGUGCAAGGAGCCAAGCAUGCAUAACAGGCCAUGAUCA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| LQ235064.1 |
|
0.0 | Sequence 1059 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| JB163395.1 |
|
0.0 | Sequence 1059 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
| HI402934.1 |
|
0.0 | Sequence 1059 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
| BT084457.2 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFb0118K06 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| BT068739.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0377F03 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| NM_001176580.1 |
|
1.5 | Zea mays uncharacterized LOC100383967 (LOC100383967), mRNA | NA | coding protein | psRNATarget | |||||||||
| EZ059533.1 |
|
3.0 | TSA: Zea mays contig60655, mRNA sequence | NA | coding protein | psRNATarget |
| 1 | PMID:15916721
"Identification and characterization of new plant microRNAs using EST analysis"; Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA; Cell Res. 15:336-360(2005). |
| 2 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |