| ncRNA ID | zma-miR171m-5p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr5:20310731-20310812 [-] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 61 - UAUUGGCGCGCCUCAAUCCGA - 81 |
| Stem-loop(if miRNA) |
-- C AG AUA AU GUAUUGGCGCG CUCAAUCCGA GCGUGGCUG G U ||||||||||| |||||||||| ||||||||| | G UAUAACUGCGC GAGUUAGGUU UGUACCGAC C G UC C CU -GG GC |
| Stem-loop sequence | GUAUUGGCGCGCCUCAAUCCGAAGGCGUGGCUGAUAGAUUGGCGCGGCAGCCAUGUUCUUGGAUUGAGCCGCGUCAAUAUCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| JB163472.1 |
|
2.5 | Sequence 1136 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
| LQ235141.1 |
|
2.5 | Sequence 1136 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| HI403011.1 |
|
2.5 | Sequence 1136 from Patent EP2074227 | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |