ncRNA ID | zma-miR167b-3p |
Species | Zea mays |
Class | miRNA |
Genome position | chr5:7688809-7688935 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 88 - GAUCAUGCUGUGACAGUUUCACU - 110 |
Stem-loop(if miRNA) |
A         -AU              - -              GACGG   UG   U  -U   GC  GUGCCCAAG   AAAGGGUGAAGCUG C CAGCAUGAUCUAAC     CAU  CUC GC  GCU  A  |||||||||   |||||||||||||| | ||||||||||||||     |||  ||| ||  |||  G  CACGGGUUU   UUUCUCACUUUGAC G GUCGUACUAGAUUG     GUA  GAG CG  CGG  U A         CCC              A U              -----   GU   -  UU   AG |
Stem-loop sequence | AGUGCCCAAGAUAAAGGGUGAAGCUGCCAGCAUGAUCUAACGACGGCAUUGCUCUGCUGCUGCAGUGAGGCUUGCGAGUGAUGGUUAGAUCAUGCUGUGACAGUUUCACUCUUUCCCUUUGGGCACA |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |