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BaseInfo

ncRNA ID ath-miRf10302-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UUGUCGGAGUCGUCAUUUUGC - NA
Stem-loop(if miRNA)          A               G           UACAAA
CUUAGAAGA GCAAAAUGACGACUC GACAACAAUAA      A
||||||||| ||||||||||||||| |||||||||||
GAAUCUUCU CGUUUUACUGCUGAG CUGUUGUUAUU      C
         A               G           CAUAAU
Stem-loop sequence CUUAGAAGAAGCAAAAUGACGACUCGGACAACAAUAAUACAAAACUAAUACUUAUUGUUGUCGGAGUCGUCAUUUUGCAUCUUCUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY649257.1
ncRNA:21   CGUUUUACUGCUGAGGCUGUU   1
  **||=|||||||||||||=||
targets:270   AGAAGAUGACGACUCCGAUAA   290

2.5 Arabidopsis thaliana hypothetical protein (At2g24440) mRNA, complete cds NA coding protein psRNATarget
BX821197.1
ncRNA:21   CGUUUUACUGCUGAGGCUGUU   1
  **||=|||||||||||||=||
targets:291   AGAAGAUGACGACUCCGAUAA   311

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL24ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX821660.1
ncRNA:21   CGUUUUACUGCUGAGGCUGUU   1
  **||=|||||||||||||=||
targets:79   AGAAGAUGACGACUCCGAUAA   99

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZA04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BX821144.1
ncRNA:21   CGUUUUACUGCUGAGGCUGUU   1
  **||=|||||||||||||=||
targets:261   AGAAGAUGACGACUCCGAUAA   281

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZE11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY085501.1
ncRNA:21   CGUUUUACUGCUGAGGCUGUU   1
  **||=|||||||||||||=||
targets:305   AGAAGAUGACGACUCCGAUAA   325

2.5 Arabidopsis thaliana clone 154487 mRNA, complete sequence NA coding protein psRNATarget
AY102544.1
ncRNA:21   CGUUUUACUGCUGAGGCUGUU   1
  **||=|||||||||||||=||
targets:288   AGAAGAUGACGACUCCGAUAA   308

2.5 Arabidopsis thaliana hypothetical protein (At2g24440/T28I24.17) mRNA, complete cds NA coding protein psRNATarget
AY116858.1
ncRNA:21   CGUUUUACUGCUGAGGCUGUU   1
  **||=|||||||||||||=||
targets:288   AGAAGAUGACGACUCCGAUAA   308

2.5 Arabidopsis thaliana hypothetical protein (At2g24440/T28I24.17) mRNA, complete cds, alternatively spliced NA coding protein psRNATarget
NM_128005.4
ncRNA:21   CGUUUUACUGCUGAGGCUGUU   1
  **||=|||||||||||||=||
targets:319   AGAAGAUGACGACUCCGAUAA   339

2.5 Arabidopsis thaliana selenium binding protein mRNA selenium binding protein(AT2G24440) coding protein psRNATarget