ncRNA ID | zma-miR167c-3p |
Species | Zea mays |
Class | miRNA |
Genome position | chr5:4303816-4303947 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 92 - GAUCAUGCUGUGGCAGCCUCACU - 114 |
Stem-loop(if miRNA) |
U      ----     C      A       --            UC  A        -G    GAGA  GCCCAA    GGGAA GAGUGA GCUGCCA  GCAUGAUCUAGC  GG GUGAUCAC  CGAG    A  ||||||    ||||| |||||| |||||||  ||||||||||||  || ||||||||  ||||    C  CGGGUU    CCCUU UUCACU CGACGGU  CGUACUAGAUCG  CC UACUGGUG  GCUC    A A      CCUG     C      C       GU            UU  G        GA    GAUA |
Stem-loop sequence | UGCCCAAGGGAACGAGUGAAGCUGCCAGCAUGAUCUAGCUCGGAGUGAUCACGCGAGGAGAACAAUAGCUCGAGGUGGUCAUGCCUUGCUAGAUCAUGCUGUGGCAGCCUCACUUCUUCCCGUCCUUGGGCA |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |