ncRNA ID | zma-miR171a-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr4:234515128-234515226 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 3 - UAUUGGCGAGGUUCAAUCAGA - 23 |
Stem-loop(if miRNA) |
          A             ----G   --   UUUUCUUAUAUAUA GAUAUUGGCG GGUUCAAUCAGAU     AUG  UAU              A |||||||||| |||||||||||||     |||  |||              A CUAUAACCGC CCGAGUUAGUCUG     UAA  GUG              U           G             UGACC   GU   GAAGUACGUACGUU |
Stem-loop sequence | GAUAUUGGCGAGGUUCAAUCAGAUGAUGUAUUUUUCUUAUAUAUAAAUUUGCAUGCAUGAAGGUGUGAAUCCAGUGUCUGAUUGAGCCGCGCCAAUAUC |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |