ncRNA ID | ath-miRf10301-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - UCCAGCGACAUGCAAACGAACAA - NA |
Stem-loop(if miRNA) |
               C         -    A    -C      AGCGAGAGUCGCCAGCGACCAGCGAUCGCAAUUUU AAGUUGUUCGUUUGC UGUCGCUGG UUCA CGAC  AAAAGU                                   U ||||||||||||||| ||||||||| |||| ||||  |||||| UUCAACAAGCAAACG ACAGCGACC AAGU GCUG  UAGCGA                                   G                U         U    C    AU      CUUUGAUCGCUGACUAGCGAUUUUUAAAAUCGCUA |
Stem-loop sequence | AAGUUGUUCGUUUGCCUGUCGCUGGUUCAACGACCAAAAGUAGCGAGAGUCGCCAGCGACCAGCGAUCGCAAUUUUUGAUCGCUAAAAUUUUUAGCGAUCAGUCGCUAGUUUCAGCGAUUAGUCGCUGAAUCCAGCGACAUGCAAACGAACAACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AF107726.1 |
|
2.5 | Arabidopsis thaliana cyclic nucleotide gated channel (CNGC4) mRNA, complete cds | NA | coding protein | psRNATarget |