| ncRNA ID | zma-miR399a-5p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr4:228641917-228642039 [-] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 81 - GUGCGGUUCUCCUCUGGCACG - 101 |
| Stem-loop(if miRNA) |
UGUGAAG -GA CA U C -C C CCA A CU AGGGU GAAU CAG GCGGUUCUCCU UGGCA GAAGG UGG G GCAG U ||||| |||| ||| ||||||||||| ||||| ||||| ||| | |||| UCCCA CUUA GUC CGUUAAGAGGA ACCGU CUUCC ACC C CGUU A --UAACG ACA CC C A UC C --A - AU |
| Stem-loop sequence | UGUGAAGAGGGUGAGAAUCACAGUGCGGUUCUCCUCUGGCACGAAGGCUGGCCAGAGCAGCUUAUAUUGCCACCACCCUUCCUUGCCAAAGGAGAAUUGCCCUGCCAUUCACAACCCUGCAAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BT068322.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0101I02 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| NM_001176436.1 |
|
3.0 | Zea mays uncharacterized LOC100383802 (LOC100383802), mRNA | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |