ncRNA ID | ath-miRf10300-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GUAGUGUCGGUCGACACUGA - NA |
Stem-loop(if miRNA) |
   UG --U UG              AUUA                  GU  GUUUCUGCA GAC  G   U  GUGUCGAUCGACAC    UUGGUGUCGGUCGAUACU  CU         G |||  |   |  ||||||||||||||    ||||||||||||||||||  ||         U CUG  C   A  CACAGCUGGCUGUG    AACCACAGCUAGCUAUGG  CA         A    GU UAU GU              -AUG                  -U  CUUGUGUCU |
Stem-loop sequence | GACUGGUUUGGUGUCGAUCGACACAUUAUUGGUGUCGGUCGAUACUGUCUGUUUCUGCAGUAUCUGUGUUCACUGGUAUCGAUCGACACCAAGUAGUGUCGGUCGACACUGAUAUCUGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DQ069810.1 |
|
2.5 | Arabidopsis thaliana At2g13270 mRNA, partial sequence | NA | coding protein | psRNATarget |