ncRNA ID | zma-miR399b-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr4:154715956-154716077 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 80 - GUGCAGCUCUCCUCUGGCAUG - 100 |
Stem-loop(if miRNA) |
GUAGCU      --GC    CA   UG          C     U --       U    GA GC       CAGGGU    GAAU  CAG  CAGCUCUCCU UGGCA G  AAGGCUG GAGA  G  A       ||||||    ||||  |||  |||||||||| ||||| |  ||||||| ||||  |       GUCCCG    CUUA  GUC  GUCGAGAGGA ACCGU C  UUCCGGU CUUU  C  U ---AAC      AUUA    CC   CU          A     C CG       -    AA AG |
Stem-loop sequence | GUAGCUCAGGGUGCGAAUCACAGUGCAGCUCUCCUCUGGCAUGAAGGCUGUGAGAGAGGCAUGACAAUUUCUGGCCUUGCCCUGCCAAAGGAGAGCUGUCCUGCCAUUCAUUAGCCCUGCAA |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |