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BaseInfo

ncRNA ID zma-miR399b-5p
Species Zea mays
Class miRNA
Genome position chr4:154715956-154716077 [-]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 80 - GUGCAGCUCUCCUCUGGCAUG - 100
Stem-loop(if miRNA) GUAGCU      --GC    CA   UG          C     U --       U    GA GC
      CAGGGU    GAAU  CAG  CAGCUCUCCU UGGCA G  AAGGCUG GAGA  G  A
      ||||||    ||||  |||  |||||||||| ||||| |  ||||||| ||||  |
      GUCCCG    CUUA  GUC  GUCGAGAGGA ACCGU C  UUCCGGU CUUU  C  U
---AAC      AUUA    CC   CU          A     C CG       -    AA AG
Stem-loop sequence GUAGCUCAGGGUGCGAAUCACAGUGCAGCUCUCCUCUGGCAUGAAGGCUGUGAGAGAGGCAUGACAAUUUCUGGCCUUGCCCUGCCAAAGGAGAGCUGUCCUGCCAUUCAUUAGCCCUGCAA

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).