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BaseInfo

ncRNA ID zma-miR156i-3p
Species Zea mays
Class miRNA
Genome position chr4:137179087-137179203 [-]
Reference genome RefGen_v2
Source miRBase
Length 22
Mature sequence(if miRNA) 17 - GCUCACUGCUCUAUCUGUCAUC - 38
Stem-loop(if miRNA) C    C   -------C         -    -         A  G   G CGGA         G
 GCGG GGG        GGUGACAGA AGAG AGUGAGCAC CG CCG G    ACGGCACCG C
 |||| |||        ||||||||| |||| ||||||||| || ||| |    ||||||||| G
 CGCC CCC        CUACUGUCU UCUC UCACUCGUG GC GGC C    UGCCGUGGU G
U    -   UCUCUCAC         A    G         C  A   G ----         A
Stem-loop sequence CGCGGCGGGCGGUGACAGAAGAGAGUGAGCACACGGCCGGGCGGAACGGCACCGGCGGAUGGUGCCGUCGCGGACGCGUGCUCACUGCUCUAUCUGUCAUCCACUCUCUCCCCCGCU

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).