ncRNA ID | zma-miR169i-3p |
Species | Zea mays |
Class | miRNA |
Genome position | chr4:47241963-47242153 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 18 |
Mature sequence(if miRNA) | 155 - GGCAGUCUCCUUGGCUAG - 172 |
Stem-loop(if miRNA) |
- A        GU  C  -U   -         U    U       U CU     -  CU C     U  -AA GAC    -  GU     C   -  AG G  G UGAGAGUG  AG UC  GGU AGCCAAGGA GACU GCCUGUG G  GGCCA CG  C CCUCA GC   G   CAUC UC  GUCGA CGA CG  C A  | ||||||||  || ||  ||| ||||||||| |||| ||||||| |  ||||| ||  | ||||| ||   |   |||| ||  ||||| ||| ||  |  C AUUCUCAC  UC AG  CCG UCGGUUCCU CUGA CGGGCAC C  CUGGU GC  G GGGGU CG   C   GUAG AG  UAGCU GCU GC  G G G C        --  -  UC   A         -    -       U -U     U  AU U     U  AAG --A    G  AG     A   A  GA C |
Stem-loop sequence | GAUGAGAGUGGUAGCUCUGGUAGCCAAGGAUGACUUGCCUGUGUGCUGGCCACGCUCCCCUCAUGCAAGGACCAUCUCGUGUCGACCGACGAGCGAGCGAGCGAUCGAUCGAUGAGAGGAUGACGAAGCUUGGGGUGUACGUUGGUCUCUCACGGGCAGUCUCCUUGGCUAGCCCUGACUCACUCUUACCG |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |