ncRNA ID | zma-miR2275a-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr4:30201533-30201654 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 18 - AGAGUUGGAGGAAAGCAAACC - 38 |
Stem-loop(if miRNA) |
       -----      A      -                        --     GGA   AG GUCAGGC     ACUGAA GUGAGA GUUGGAGGAAAGCAAACCGGCUGG  GUAUC   UUC  C |||||||     |||||| |||||| ||||||||||||||||||||||||  |||||   ||| UAGUCUG     UGACUU CACUCU UAACCUCCUUUUGUUUGGCUGGCC  CGUGG   AGG  A        AUAGC      C      A                        GU     --G   CA |
Stem-loop sequence | GUCAGGCACUGAAAGUGAGAGUUGGAGGAAAGCAAACCGGCUGGGUAUCGGAUUCAGCAACGGAGGGUGCUGCCGGUCGGUUUGUUUUCCUCCAAUAUCUCACCUUCAGUCGAUAGUCUGAU |
1 | PMID:19584097
"Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009). |