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BaseInfo

ncRNA ID	ath-miRf10298-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CUCGACCUGGGGGUCGAGUGA - NA
Stem-loop(if miRNA)	G A            GG            G G   GGGUGG G   A GAU A GUUACUCGACCU  GGGUCGAGUGAU U AUC      U GUC G ||| | ||||||||||||  |||||||||||| | |||      | ||| CUA U UAGUGAGCUGGG  UCCAGCUCACUG A UAG      G UAG A    G G            GG            A G   -----A G   A
Stem-loop sequence	GAUGAAGUUACUCGACCUGGGGGUCGAGUGAUGUGAUCGGGUGGUGGUCAGAAGAUGGAGAUGAAGUCACUCGACCUGGGGGUCGAGUGAUGUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_103391.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *|||||||||||||||||||| targets:1104   CCACUCGACCCCCAGGUCGAG   1124 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT015478.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *=||||||||||||||||||| targets:136   AUACUCGACCCCCAGGUCGAG   156 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *=||||||||||||||||||| targets:136   AUACUCGACCCCCAGGUCGAG   156 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   |=|||||||||||*||||||| targets:308   UUACUCGACCCCCUGGUCGAG   328 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *||||||||||||*||||||| targets:230   CCACUCGACCCCCUGGUCGAG   250 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *||||||||||||*||||||| targets:230   CCACUCGACCCCCUGGUCGAG   250 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   |||||||||||||*||||||| targets:1571   UCACUCGACCCCCUGGUCGAG   1591 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   ||||||||||||*|||||||| targets:1617   UCACUCGACCCCGAGGUCGAG   1637 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *||||||||||||*||||||| targets:124   CCACUCGACCCCCUGGUCGAG   144 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *||||||||||||*||||||| targets:499   CCACUCGACCCCCUGGUCGAG   519 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *||||||||||||*||||||| targets:499   CCACUCGACCCCCUGGUCGAG   519 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *||||||||||||*||||||| targets:90   CCACUCGACCCCCUGGUCGAG   110 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *|||||||||*|||||||||| targets:449   CCACUCGACCACCAGGUCGAG   469 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *|||||||||||*|||||||| targets:854   CCACUCGACCCCGAGGUCGAG   874 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
BT025674.1	ncRNA:21   AG-UGAGCUGGGGGUCCAGCUC   1   ||-||||||||||||||||||| targets:186   UCUACUCGACCCCCAGGUCGAG   207 Target Full Sequence	2.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   *|||||||||||*|||||||* targets:1059   GCACUCGACCCCGAGGUCGAC   1079 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT015478.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   |=||||*||||||*||||||| targets:301   UUACUCAACCCCCUGGUCGAG   321 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   |=||||*||||||*||||||| targets:301   UUACUCAACCCCCUGGUCGAG   321 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:21   AGUGAGCUGGGGGUCCAGCUC   1   |=||*||||||||*||||||| targets:583   UUACYCGACCCCCUGGUCGAG   603 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget