ncRNA ID | zma-miR159g-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr4:25719885-25720136 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 54 - GUGCUCCCUUCACACCAAUAA - 74 |
Stem-loop(if miRNA) |
AGUUUGAUUCACU    - U    CC   GACUAGACGGUCUGGUCUUAAGGCGGUGCUCCCUUCACACCAAUAAACGGUCGAUCUGAUGGGUGGUACAGCUGCUCGUUCAUGGUUCCCACUGUCCCAUCUCA              AGAC C GAUC  CUA                                                                                                        U              |||| | ||||  |||                                                                                                        C              CGUC U GAGG  GAA                                                                                                        A -------------    U -    --   GUGAGGUUUGUCGCCAGUUGCUUCCCCUGCUCCGUCGAGGAGCCAGUACGUUUGGUGUUCGGGUAGAGUUCGUAGAGAGCGAGAGAGUACUAGAAGAGAGAGAG |
Stem-loop sequence | AGUUUGAUUCACUAGACCUGAUCCCCUAGACUAGACGGUCUGGUCUUAAGGCGGUGCUCCCUUCACACCAAUAAACGGUCGAUCUGAUGGGUGGUACAGCUGCUCGUUCAUGGUUCCCACUGUCCCAUCUCAUCAGAGAGAGAGAAGAUCAUGAGAGAGCGAGAGAUGCUUGAGAUGGGCUUGUGGUUUGCAUGACCGAGGAGCUGCCUCGUCCCCUUCGUUGACCGCUGUUUGGAGUGAAGGGAGUUCUGC |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |