Search result

BaseInfo

ncRNA ID zma-miR159g-5p
Species Zea mays
Class miRNA
Genome position chr4:25719885-25720136 [+]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 54 - GUGCUCCCUUCACACCAAUAA - 74
Stem-loop(if miRNA) AGUUUGAUUCACU    - U    CC   GACUAGACGGUCUGGUCUUAAGGCGGUGCUCCCUUCACACCAAUAAACGGUCGAUCUGAUGGGUGGUACAGCUGCUCGUUCAUGGUUCCCACUGUCCCAUCUCA
             AGAC C GAUC  CUA                                                                                                        U
             |||| | ||||  |||                                                                                                        C
             CGUC U GAGG  GAA                                                                                                        A
-------------    U -    --   GUGAGGUUUGUCGCCAGUUGCUUCCCCUGCUCCGUCGAGGAGCCAGUACGUUUGGUGUUCGGGUAGAGUUCGUAGAGAGCGAGAGAGUACUAGAAGAGAGAGAG
Stem-loop sequence AGUUUGAUUCACUAGACCUGAUCCCCUAGACUAGACGGUCUGGUCUUAAGGCGGUGCUCCCUUCACACCAAUAAACGGUCGAUCUGAUGGGUGGUACAGCUGCUCGUUCAUGGUUCCCACUGUCCCAUCUCAUCAGAGAGAGAGAAGAUCAUGAGAGAGCGAGAGAUGCUUGAGAUGGGCUUGUGGUUUGCAUGACCGAGGAGCUGCCUCGUCCCCUUCGUUGACCGCUGUUUGGAGUGAAGGGAGUUCUGC

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).