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BaseInfo

ncRNA ID zma-miR167a-3p
Species Zea mays
Class miRNA
Genome position chr3:119175685-119175874 [+]
Reference genome RefGen_v2
Source miRBase
Length 22
Mature sequence(if miRNA) 151 - GAUCAUGCAUGACAGCCUCAUU - 172
Stem-loop(if miRNA) U     -----  C   U      A    C  -            UC       GUU     CAUAUUAGC     UCCAC      -      U      -  
 GCUCU     UG GAA GAGUGA GCUG CA GCAUGAUCUAGC  UGAUUUG   GGCAC         AGGCG     GCACAG CUAGAC AGAGUG GCC
 |||||     || ||| |||||| |||| || ||||||||||||  |||||||   |||||         |||||     |||||| |||||| |||||| ||U
 CGGGG     AC CUU CUUACU CGAC GU CGUACUAGAUUG  GCUAAAC   CCGUG         UUCGC     UGUGUC GGUCUG UCUCGC CGC
-     UCUUA  A   C      C    A  A            UU       -GU     --------U     ---UC      U      C      G  
Stem-loop sequence UGCUCUUGCGAAUGAGUGAAGCUGCCAGCAUGAUCUAGCUCUGAUUUGGUUGGCACCAUAUUAGCAGGCGUCCACGCACAGCUAGACUAGAGUGGCCUCGCGCGCUCUCGUCUGGUCUGUGUCUCGCUUUGUGCCUGCAAAUCGUUGUUAGAUCAUGCAUGACAGCCUCAUUCCUUCACAAUUCUGGGGC

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).