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BaseInfo

ncRNA ID zma-miR169a-3p
Species Zea mays
Class miRNA
Genome position chr3:37610280-37610409 [+]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 92 - GGCAAGUUGUUCUUGGCUACA - 112
Stem-loop(if miRNA)     CU    GA        C         UG         UC     GACGCCUCUUGAUCUC
UAGG  CGGG  CUAUGGUG AGCCAAGGA  ACUUGCCGA  GAUGU                G
||||  ||||  |||||||| |||||||||  |||||||||  |||||                U
GUCC  GUCC  GGUGCCAC UCGGUUCUU  UGAACGGCU  CUAGC                C
    UC    UC        A         GU         -A     CGCUGCUAGACUGCUG
Stem-loop sequence UAGGCUCGGGGACUAUGGUGCAGCCAAGGAUGACUUGCCGAUCGAUGUGACGCCUCUUGAUCUCGUCGUCGUCAGAUCGUCGCCGAUCAUCGGCAAGUUGUUCUUGGCUACACCGUGGCUCCUGCUCCUG

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).