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BaseInfo

ncRNA ID	zma-miR393b-3p
Species	Zea mays
Class	miRNA
Genome position	chr3:18638816-18638923 [+]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	86 - AUCAAUGCGAUCCUUUUGGAGG - 107
Stem-loop(if miRNA)	--G                         --AUU  UU  AUUUUUUCAUGCAUGGC    UCCAAAGGGAUCGCAUUGAUCCAUC     CC  CC                 U    |||||||||||||||||||||||||     ||  ||    AGGUUUUCCUAGCGUAACUAGGUAG     CA  GG                 G CGG                         CUGUU  --  AACGUCUGCUGCUUCUG
Stem-loop sequence	GUCCAAAGGGAUCGCAUUGAUCCAUCAUUCCUUCCAUUUUUUCAUGCAUGGCUGGUCUUCGUCGUCUGCAAGGACUUGUCGAUGGAUCAAUGCGAUCCUUUUGGAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB169111.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:9   ACUCCAAAGGGAUCGCAUUGAU   30 Target Full Sequence	1.0	Sequence 6775 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240780.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:9   ACUCCAAAGGGAUCGCAUUGAU   30 Target Full Sequence	1.0	Sequence 6775 from Patent EP2985353	NA	coding protein	psRNATarget
HI408650.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:9   ACUCCAAAGGGAUCGCAUUGAU   30 Target Full Sequence	1.0	Sequence 6775 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235489.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:8   ACUCCAAAGGGAUCGCAUUGAU   29 Target Full Sequence	1.0	Sequence 1484 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235201.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:8   ACUCCAAAGGGAUCGCAUUGAU   29 Target Full Sequence	1.0	Sequence 1196 from Patent EP2985353	NA	coding protein	psRNATarget
JB163532.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:8   ACUCCAAAGGGAUCGCAUUGAU   29 Target Full Sequence	1.0	Sequence 1196 from Patent EP2559767	NA	coding protein	psRNATarget
JB163820.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:8   ACUCCAAAGGGAUCGCAUUGAU   29 Target Full Sequence	1.0	Sequence 1484 from Patent EP2559767	NA	coding protein	psRNATarget
HI403071.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:8   ACUCCAAAGGGAUCGCAUUGAU   29 Target Full Sequence	1.0	Sequence 1196 from Patent EP2074227	NA	coding protein	psRNATarget
HI403359.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *|||||||=||||||||||||| targets:8   ACUCCAAAGGGAUCGCAUUGAU   29 Target Full Sequence	1.0	Sequence 1484 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242107.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *||||*||=||||||||||||| targets:117   ACUCCUAAGGGAUCGCAUUGAU   138 Target Full Sequence	2.0	Sequence 8102 from Patent EP2985353	NA	coding protein	psRNATarget
JB170438.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *||||*||=||||||||||||| targets:117   ACUCCUAAGGGAUCGCAUUGAU   138 Target Full Sequence	2.0	Sequence 8102 from Patent EP2559767	NA	coding protein	psRNATarget
HI409977.1	ncRNA:22   GGAGGUUUUCCUAGCGUAACUA   1   *||||*||=||||||||||||| targets:117   ACUCCUAAGGGAUCGCAUUGAU   138 Target Full Sequence	2.0	Sequence 8102 from Patent EP2074227	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).