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BaseInfo

ncRNA ID zma-miR156b-3p
Species Zea mays
Class miRNA
Genome position chr3:7774272-7774395 [-]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 19 - GCUCACCCUCUAUCUGUCAGU - 39
Stem-loop(if miRNA)      A    UU   AG U        -    A        A      GGUU     C    A
AGAUG GUUU  UGA  G UUGACAGA AGAG GUGAGCAC CACGGU    UCUUA CAUG G
||||| ||||  |||  | |||||||| |||| |||||||| ||||||    ||||| |||| U
UCUAC CGAA  ACU  C GACUGUCU UCUC CACUCGUG GUGUCG    AGGAU GUAC G
     C    CU   CA U        A    C        C      ----     C    U
Stem-loop sequence AGAUGAGUUUUUUGAAGGUUUGACAGAAGAGAGUGAGCACACACGGUGGUUUCUUACCAUGAGUGUCAUGCUAGGAGCUGUGCGUGCUCACCCUCUAUCUGUCAGUCACUCAUCAAGCCCAUCU

Reference

1 PMID:15916721
"Identification and characterization of new plant microRNAs using EST analysis";
Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA;
Cell Res. 15:336-360(2005).
2 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).