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BaseInfo

ncRNA ID ath-miR2933a
Species Arabidopsis thaliana
Class miRNA
Genome position chr1:11901409-11901520 [+]
Reference genome TAIR10
Source miRBase
Length 22
Mature sequence(if miRNA) 59 - GAAAUCGGAGAGGAAAUUCGCC - 80
Stem-loop(if miRNA) GAAA   G  GG        AG        GA A G     - G  GG       G
    UUC UU  CGAUUUUG  UGAAAUCG  G G GAAUU C UC  CGAUUUU A
    ||| ||  ||||||||  ||||||||  | | ||||| | ||  |||||||
    AAG AG  GCUAAAGU  GUUUUAGC  C C CUUAA G AG  GCUAAAG G
CUAA   G  AG        GA        GG - G     A G  AG       U
Stem-loop sequence GAAAUUCGUUGGCGAUUUUGAGUGAAAUCGGAGAGGGAAUUCGUCGGCGAUUUUGAGUGAAAUCGGAGAGGAAAUUCGCCGGCGAUUUUGAGUGAAAUCGGAGAGGAAAAUC

Reference

1 PMID:20042113
"MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana";
Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H;
BMC Genomics. 10:643(2009).