| ncRNA ID | zma-miR319b-5p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr3:2801942-2802154 [+] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 23 - AGAGCGUCCUUCAGUCCACUC - 43 |
| Stem-loop(if miRNA) |
GAC U - -U AU A A GU CU UA ---- G G AC C CA C AAACGG C GACGA G GC GG GGA G GAGC CCUUCAGUCCA CAGGGGCGGUGC GGGUCGAA UUA CU CCG UCAUUCAC CA UGC AAGC C A ||||| | || || ||| | |||| ||||||||||| |||||||||||| |||||||| ||| || ||| |||||||| || ||| |||| | UUGUU C CG CC CCU C CUCG GGAAGUCAGGU GUUUCUGCCACG UCUAGCUU AAU GA GGC AGUAAGUG GU ACG UUCG G U --- C U CU CU C - UG UC -C CGAA G G GA A AG U ACCAAA G |
| Stem-loop sequence | GACGACGAUGGCUGGAUGGAAGAGAGCGUCCUUCAGUCCACUCAGGGGCGGUGCUAGGGUCGAAUUAGCUGCCGACUCAUUCACCCACAUGCCAAGCAAACGGCCAUGGAAACCAGCUUUGCAGAUGAGUGAAUGAAGCGGGAGGUAAAAGCUUCGAUCUCGCACCGUCUUUGCUUGGACUGAAGGGUGCUCCCUCCUCCCUCGCUCCUUGUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HI408665.1 |
|
0.0 | Sequence 6790 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
| LQ240795.1 |
|
0.0 | Sequence 6790 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| JB169126.1 |
|
0.0 | Sequence 6790 from Patent EP2559767 | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |