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BaseInfo

ncRNA ID	zma-miR160f-3p
Species	Zea mays
Class	miRNA
Genome position	chr2:236870675-236870790 [-]
Reference genome	RefGen_v2
Source	miRBase
Length	21
Mature sequence(if miRNA)	18 - GCGUGCGAGGUGCCAGGCAUG - 38
Stem-loop(if miRNA)	-       AAGAUAG              U  C        -  U    -       CAC  GAGGUGA       GGAAUAUGCCUGGC CC UGUAUGCC GC CGCA UGGCUAC   C  |||||||       |||||||||||||| || |||||||| || |||| |||||||  CUCUAUU       UUUUGUACGGACCG GG GCGUGCGG CG GCGU GCUGGUG   G C       --AAUAA              U  A        U  -    U       UCC
Stem-loop sequence	GAGGUGAAAGAUAGGGAAUAUGCCUGGCUCCCUGUAUGCCGCUCGCAUGGCUACCACCGCCUGUGGUCGUUGCGGCUGGCGUGCGAGGUGCCAGGCAUGUUUUAAUAAUUAUCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020541501.1	ncRNA:21   GUACGGACCGUGGAGCGUGCG   1   |**||||||||||||||*||| targets:450   CCCGCCUGGCACCUCGCCCGC   470 Target Full Sequence	2.5	PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC109941037), mRNA	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).