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BaseInfo

ncRNA ID	zma-miR156f-3p
Species	Zea mays
Class	miRNA
Genome position	chr2:180193496-180193662 [-]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	16 - GCUCACUUCUCUUUCUGUCAGC - 37
Stem-loop(if miRNA)	U  C  CU   U  U U           -    -           U    C  A    A     AUA - GCUGCCCCAAAGCGACGG  GG UG  AGA GG G GGCUGACAGAA GAGA GUGAGCACGCA CGGC AG CUGC UCUAU   C G                  A  || ||  ||| || | ||||||||||| |||| ||||||||||| |||| || |||| |||||   | |                  U  CC AC  UCU UC C UCGACUGUCUU CUCU CACUCGUGCGU GUCG UC GACG CGGAU   C G                  C U  U  --   C  U -           U    U           U    -  -    -     --- C GAUCCGAUCCGUAGGUAG
Stem-loop sequence	UGGCUGCUAGAUGGUGUGGCUGACAGAAGAGAGUGAGCACGCAUCGGCCAGACUGCAUCUAUAUACGGCUGCCCCAAAGCGACGGAUCGAUGGAUGCCUAGCCUAGGCCUAGGCGCAGCUGCUGUUGCGUGCUCACUUCUCUUUCUGUCAGCUCUCUCUCUCAUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ240713.1	ncRNA:22   CGACUGUCUUUCUCUUCACUCG   1   |||||||||||||||||||||| targets:8   GCUGACAGAAAGAGAAGUGAGC   29 Target Full Sequence	0.0	Sequence 6708 from Patent EP2985353	NA	coding protein	psRNATarget
HI408583.1	ncRNA:22   CGACUGUCUUUCUCUUCACUCG   1   |||||||||||||||||||||| targets:8   GCUGACAGAAAGAGAAGUGAGC   29 Target Full Sequence	0.0	Sequence 6708 from Patent EP2074227	NA	coding protein	psRNATarget
JB169044.1	ncRNA:22   CGACUGUCUUUCUCUUCACUCG   1   |||||||||||||||||||||| targets:8   GCUGACAGAAAGAGAAGUGAGC   29 Target Full Sequence	0.0	Sequence 6708 from Patent EP2559767	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).