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BaseInfo

ncRNA ID	zma-miR2118g
Species	Zea mays
Class	miRNA
Genome position	chr2:49356075-49356219 [+]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	90 - UUCCUGAUGCCUCCUAUUCCUA - 111
Stem-loop(if miRNA)	---     A   UGAA   UU        AC           -A   GA            UU U  A   A GCCA   GGAAA GGA    AGA  CUAAGAGC  UAGGAAUAGGA  CAU  AGGAAAGCAUUA  G GC UGG G ||||   ||||| |||    |||  ||||||||  |||||||||||  |||  ||||||||||||  | || ||| CGGU   CCUUU CCU    UCU  GAUUCUCG  AUCCUUAUCCU  GUA  UCCUUUUGUAGU  C CG AUU A     AUU     C   -UCC   UG        GA           CC   -G            -- -  G   U
Stem-loop sequence	GCCAGGAAAAGGAUGAAAGAUUCUAAGAGCACUAGGAAUAGGAACAUGAAGGAAAGCAUUAUUGUGCAUGGAGAUUUAGGCCUGAUGUUUUCCUGAUGCCUCCUAUUCCUAAGGCUCUUAGGUUCUCCUUCCCUUUCCUUAUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU947561.1	ncRNA:22   AUCCUUAUCCUCCGUAGUCCUU   1   |=|*|||||*|||||||||||| targets:51   UGGAAAUAGAAGGCAUCAGGAA   72 Target Full Sequence	2.5	Zea mays clone 347178 mRNA sequence	NA	coding protein	psRNATarget

Reference

1	PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009).