| ncRNA ID | zma-miR2118b |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr2:49290033-49290150 [+] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 88 - UUCCCGAUGCCUCCCAUUCCUA - 109 |
| Stem-loop(if miRNA) |
-A G A - CAU UGUU U CAG UAAGAGCAGUGGGAAUGGGA CAU G GGAAA GCC CC GGUUUCC CCUC A |||||||||||||||||||| ||| | ||||| ||| || ||||||| |||| AUUCUUGUUAUCCUUACCCU GUA C CCUUU UGG GG UCGAAGG GGAG A CC G - G CUU ---U U CCA |
| Stem-loop sequence | UAAGAGCAGUGGGAAUGGGAACAUGGAGGAAAGCCCAUCCUGUUGGUUUCCUCCUCCAGAAACCGAGGUGGAAGCUUGGUUCGGUGUUUCCCGAUGCCUCCCAUUCCUAUUGUUCUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_001154179.1 |
|
2.5 | Zea mays disease resistance protein RGA4 (LOC100281260), mRNA | NA | coding protein | psRNATarget | |||||||||
| EU956140.1 |
|
2.5 | Zea mays clone 1558009 disease resistance protein RGA4 mRNA, complete cds | NA | coding protein | psRNATarget |
| 1 | PMID:19584097
"Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009). |