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BaseInfo

ncRNA ID zma-miR156e-3p
Species Zea mays
Class miRNA
Genome position chr2:31493020-31493145 [+]
Reference genome RefGen_v2
Source miRBase
Length 22
Mature sequence(if miRNA) 87 - GCUCACUGCUCUCUCUGUCAUC - 108
Stem-loop(if miRNA) C  - C   C C  GC    -       -    -         A     GGU          CGGC
 CG G GGG G GC  GCGG UGACAGA AGAG AGUGAGCAC CGGCC   GUGACGGCAC    G
 || | ||| | ||  |||| ||||||| |||| ||||||||| |||||   ||||||||||
 GC C CCC C CG  CGCC ACUGUCU UCUC UCACUCGUG GCCGG   CGCUGCCGUG    C
-  A U   A A  GU    U       C    G         C     ---          UAGG
Stem-loop sequence CCGGCGGGCGCGCGCGCGGUGACAGAAGAGAGUGAGCACACGGCCGGUGUGACGGCACCGGCGCGGAUGUGCCGUCGCGGCCGCGUGCUCACUGCUCUCUCUGUCAUCCGCUGGCACACCCUCACG

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).