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BaseInfo

ncRNA ID	zma-miR169c-3p
Species	Zea mays
Class	miRNA
Genome position	chr2:11299979-11300112 [+]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	96 - GGCAAGUCUGUCCUUGGCUACA - 117
Stem-loop(if miRNA)	AU    U       -   A  C          -         -----------G   - U GAACCUGGAGGCG   GAGG AGAGAAC GGG UG AGCCAAGGAU GACUUGCCG            CUC C G             U   |||| ||||||| ||| || |||||||||| |||||||||            ||| | |             C   CUCC UCUCUUG UCC AC UCGGUUCCUG CUGAACGGC            CGG G U             U -U    U       A   -  A          U         UGAUUCAAGAUU   U - CGUGUCGUUCGAC
Stem-loop sequence	AUGAGGUAGAGAACGGGAUGCAGCCAAGGAUGACUUGCCGGCUCCUGGAACCUGGAGGCGUCUCAGCUUGCUGUGCUGUGGCUUAGAACUUAGUCGGCAAGUCUGUCCUUGGCUACACCUAGUUCUCUUCCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020548143.1	ncRNA:22   ACAUCGGUUCCUGUCUGAACGG   1   |||||||||||||||||||||| targets:691   UGUAGCCAAGGACAGACUUGCC   712 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103648407 (LOC103648407), mRNA	NA	coding protein	psRNATarget
BT060668.2	ncRNA:22   ACAUCGGUUCCUGUCUGAACGG   1   |||||||||||||||||||||| targets:947   UGUAGCCAAGGACAGACUUGCC   968 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0031E01 mRNA, complete cds	NA	coding protein	psRNATarget

Reference

1	PMID:15916721 "Identification and characterization of new plant microRNAs using EST analysis"; Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA; Cell Res. 15:336-360(2005).
2	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).