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BaseInfo

ncRNA ID zma-miR395a-5p
Species Zea mays
Class miRNA
Genome position chr2:6333397-6333545 [-]
Reference genome RefGen_v2
Source miRBase
Length 23
Mature sequence(if miRNA) 105 - GUUCUCCUCAAACCACUUCAGUU - 127
Stem-loop(if miRNA) UAUUG        U    UG         U     C      G U       C     AGUUUAA    ACUG      C
     GUUGGUUG CACC  GAGUUCUCC CAAAC ACUUCA U GCUGCAC UAGCU       UGGC    UGCUUG G
     |||||||| ||||  ||||||||| ||||| |||||| | ||||||| |||||       ||||    ||||||
     CGACUAAC GUGG  CUCAAGGGG GUUUG UGAAGU A CGAUGUG GUCGA       GCCG    GCGAAC U
-UUAA        U    GU         -     -      G U       U     ------G    ----      G
Stem-loop sequence UAUUGGUUGGUUGUCACCUGGAGUUCUCCUCAAACCACUUCAGUUGCUGCACCUAGCUAGUUUAAUGGCACUGUGCUUGCGUGCAAGCGGCCGGAGCUGUGUGUAGCUAGUGAAGUGUUUGGGGGAACUCUGGGUGUCAAUCAGCAAUU

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).