ncRNA ID | zma-miR395a-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr2:6333397-6333545 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 105 - GUUCUCCUCAAACCACUUCAGUU - 127 |
Stem-loop(if miRNA) |
UAUUG        U    UG         U     C      G U       C     AGUUUAA    ACUG      C      GUUGGUUG CACC  GAGUUCUCC CAAAC ACUUCA U GCUGCAC UAGCU       UGGC    UGCUUG G      |||||||| ||||  ||||||||| ||||| |||||| | ||||||| |||||       ||||    ||||||      CGACUAAC GUGG  CUCAAGGGG GUUUG UGAAGU A CGAUGUG GUCGA       GCCG    GCGAAC U -UUAA        U    GU         -     -      G U       U     ------G    ----      G |
Stem-loop sequence | UAUUGGUUGGUUGUCACCUGGAGUUCUCCUCAAACCACUUCAGUUGCUGCACCUAGCUAGUUUAAUGGCACUGUGCUUGCGUGCAAGCGGCCGGAGCUGUGUGUAGCUAGUGAAGUGUUUGGGGGAACUCUGGGUGUCAAUCAGCAAUU |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |