ncRNA ID | zma-miR395i-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr2:6331942-6332011 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 48 - GUUCCCUACAAGCACUUCACGA - 69 |
Stem-loop(if miRNA) |
--        A               ACCU      A   AGUUCCCU CAAGCACUUCACGAU    UGGCUU A   |||||||| |||||||||||||||    |||||| U   UCAAGGGG GUUUGUGAAGUGUUG    ACCGGA A UC        -               ----      A |
Stem-loop sequence | AGUUCCCUACAAGCACUUCACGAUACCUUGGCUUAAUAAAGGCCAGUUGUGAAGUGUUUGGGGGAACUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020552243.1 |
|
2.5 | PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC109945872), mRNA | NA | coding protein | psRNATarget |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |