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BaseInfo

ncRNA ID zma-miR395i-5p
Species Zea mays
Class miRNA
Genome position chr2:6331942-6332011 [-]
Reference genome RefGen_v2
Source miRBase
Length 22
Mature sequence(if miRNA) 48 - GUUCCCUACAAGCACUUCACGA - 69
Stem-loop(if miRNA) --        A               ACCU      A
  AGUUCCCU CAAGCACUUCACGAU    UGGCUU A
  |||||||| |||||||||||||||    |||||| U
  UCAAGGGG GUUUGUGAAGUGUUG    ACCGGA A
UC        -               ----      A
Stem-loop sequence AGUUCCCUACAAGCACUUCACGAUACCUUGGCUUAAUAAAGGCCAGUUGUGAAGUGUUUGGGGGAACUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020552243.1
ncRNA:22   AGCACUUCACGAACAUCCCUUG   1
  |*||||||||||||*||||||=
targets:318   UGGUGAAGUGCUUGGAGGGAAU   339

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC109945872), mRNA NA coding protein psRNATarget

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).