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BaseInfo

ncRNA ID	zma-miR395p-5p
Species	Zea mays
Class	miRNA
Genome position	chr10:144744865-144744953 [+]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	2 - GUUCCCUUCAAGCACUUCACAU - 23
Stem-loop(if miRNA)	--        U              GAG    -CAU  --     AC   AGUUCCCU CAAGCACUUCACAU   GCAC    UC  AAAUG  A   |||||||| ||||||||||||||   ||||    ||  |||||  A   UCAAGGGG GUUUGUGAAGUGUA   UGUG    AG  UUUAC  C UC        -              --A    UAUU  AA     CU
Stem-loop sequence	AGUUCCCUUCAAGCACUUCACAUGAGGCACCAUUCAAAUGACAACUCCAUUUAAGAUUAUGUGUAAUGUGAAGUGUUUGGGGGAACUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552243.1	ncRNA:22   UACACUUCACGAACUUCCCUUG   1   **||||||||||||=||||||= targets:318   UGGUGAAGUGCUUGGAGGGAAU   339 Target Full Sequence	2.5	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC109945872), mRNA	NA	coding protein	psRNATarget
NM_001150221.2	ncRNA:22   UACACUUCACGAACUUCCCUUG   1   ||||*||||*|||||||||||| targets:815   AUGUAAAGUCCUUGAAGGGAAC   836 Target Full Sequence	2.5	Zea mays CASP-like protein 18 (si606062a03(608)), mRNA	NA	coding protein	psRNATarget
EU962137.1	ncRNA:22   UACACUUCACGAACUUCCCUUG   1   ||||*||||*|||||||||||| targets:817   AUGUAAAGUCCUUGAAGGGAAC   838 Target Full Sequence	2.5	Zea mays clone 240514 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001111616.1	ncRNA:22   UACACUUCACGAACUUCCCUUG   1   ||-|||=|*||||||||||||* targets:874   AU-UGAGGGGCUUGAAGGGAAG   894 Target Full Sequence	3.0	Zea mays myb2 (myb2), mRNA	NA	coding protein	psRNATarget
AF458962.1	ncRNA:22   UACACUUCACGAACUUCCCUUG   1   ||-|||=|*||||||||||||* targets:874   AU-UGAGGGGCUUGAAGGGAAG   894 Target Full Sequence	3.0	Zea mays CDC5 protein (CDC5) mRNA, complete cds	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).