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BaseInfo

ncRNA ID zma-miR171k-5p
Species Zea mays
Class miRNA
Genome position chr10:137316379-137316482 [-]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 61 - UGGUAUUGUUUCGGCUCAUGU - 81
Stem-loop(if miRNA) -G    -      GACG      C         U             - U   U
  GGAG GAAGAA    ACAUGG GUGGUAUUG UUCGGCUCAUGUC C UCU G
  |||| ||||||    |||||| ||||||||| ||||||||||||| | ||| A
  UCUU CUUCUU    UGUACU CACUAUAAC AAGCCGAGUGUAG G AGG C
AG    A      ---A      -         C             U U   U
Stem-loop sequence GGGAGGAAGAAGACGACAUGGCGUGGUAUUGUUUCGGCUCAUGUCCUUCUUGACUGGAUGUGAUGUGAGCCGAACCAAUAUCACUCAUGUAUUCUUCAUUCUGA

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).