| ncRNA ID | zma-miR2118c |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr10:117752102-117752234 [-] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 28 - UUCCUAAUGCCUCCCAUUCCUA - 49 |
| Stem-loop(if miRNA) |
G UAAA G A C -A GG - --U U G AAGAGGAAG GAU AUCUAAGAGC GUGGG AUGGGA CAU AGGAAGGC C AUGAGGU G | ||||||||| ||| |||||||||| ||||| |||||| ||| |||||||| | ||||||| C UUCUCCUUC CUA UGGAUUCUUG UAUCC UACCCU GUA UCCUUCUG G UACUCCA A G ---- G C U CC -A U UUU A |
| Stem-loop sequence | GGAAGAGGAAGUAAAGAUGAUCUAAGAGCAGUGGGCAUGGGAACAUGGAGGAAGGCCUAUGAGGUUGAAACCUCAUUUUGUGUCUUCCUAAUGCCUCCCAUUCCUAUCGUUCUUAGGUGAUCCUUCCUCUUGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EU943944.1 |
|
2.5 | Zea mays clone 1701522 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| EU955520.1 |
|
3.0 | Zea mays clone 1535323 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| NM_001149460.1 |
|
3.0 | Zea mays hypothetical protein (TIDP3280), mRNA | NA | coding protein | psRNATarget |
| 1 | PMID:19584097
"Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009). |