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BaseInfo

ncRNA ID	zma-miR2118a
Species	Zea mays
Class	miRNA
Genome position	chr10:117728730-117728847 [-]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	12 - UUCCUGAUGCCUCUCAUUCCUA - 33
Stem-loop(if miRNA)	A            -A   GA          --    U UGAA    U   C CCUAAGGGC GUAGGGAUGAGA  CAU  AGGAACGCGA  GUGC C    UUUC CGU U ||||||||| ||||||||||||  |||  ||||||||||  |||| |    |||| ||| C GGAUUCUUG UAUCCUUACUCU  GUA  UCCUUGUGCU  CACG G    GGAG GCA G          G            CC   -G          GU    U UACA    -   C
Stem-loop sequence	CCUAAGGGCAGUAGGGAUGAGAACAUGAAGGAACGCGAGUGCUCUGAAUUUCUCGUCUCGCACGGAGGACAUGUGCACUGUCGUGUUCCUGAUGCCUCUCAUUCCUAUGGUUCUUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008647273.2	ncRNA:22   AUCCUUACUCUCCGUAGUCCUU   1   **||||*||*|||||||||||| targets:2158   GUGGAAGGAAAGGCAUCAGGAA   2179 Target Full Sequence	2.5	PREDICTED: Zea mays proteinaceous RNase P 1, chloroplastic/mitochondrial (LOC103626926), transcript variant X2, mRNA	NA	coding protein	psRNATarget

Reference

1	PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009).