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BaseInfo

ncRNA ID	zma-miR2118e
Species	Zea mays
Class	miRNA
Genome position	chr10:117678636-117678778 [-]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	33 - UUCCUGAUGUCUCCCAUUCCUA - 54
Stem-loop(if miRNA)	-     U     AAA   AA GU        A          -AA    GA          ----------     CCAA GGAAG GGAAG   GAG  U  CUAAGAGC GUGGGAAUGG   ACAU  AGGAAAGCAU          GAACU |||| ||||| |||||   |||  |  |||||||| ||||||||||   ||||  ||||||||||          ||||A GGUU CCUUC CCUUC   CUC  G  GAUUCUUG CAUCCUUACC   UGUA  UCCUUUUGUA          CUUGU     U     U     ---   -- UG        G          CUC    -G          AGUCUUUUUU
Stem-loop sequence	CCAAGGAAGUGGAAGAAAGAGAAUGUCUAAGAGCAGUGGGAAUGGAAACAUGAAGGAAAGCAUGAACUAUGUUCUUUUUUCUGAAUGUUUUCCUGAUGUCUCCCAUUCCUACGGUUCUUAGGUGCUCCUUCCUCUUCCUUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU950890.1	ncRNA:22   AUCCUUACCCUCUGUAGUCCUU   1   |=*||*||||||||||||*||| targets:88   UGUGACUGGGAGACAUCAAGAA   109 Target Full Sequence	2.5	Zea mays clone 645462 mRNA sequence	NA	coding protein	psRNATarget

Reference

1	PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009).