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BaseInfo

ncRNA ID zma-miR2118f
Species Zea mays
Class miRNA
Genome position chr10:117678415-117678534 [-]
Reference genome RefGen_v2
Source miRBase
Length 22
Mature sequence(if miRNA) 10 - UUCCCAAUGCCUUCCAUGCCUA - 31
Stem-loop(if miRNA)                     -A   A      A  C     ---------          GUAC
UAAGAGCAGUGGGCAUGGGA  CAU GGGGAA GC AAACU         UUCUUUACCU    A
||||||||||||||||||||  ||| |||||| || |||||         ||||||||||
AUUCUUGUUAUCCGUACCUU  GUA CCCUUU UG UUUGA         AAGAGGUGGG    A
                    CC   A      G  A     UUAGAGGUC          AAUC
Stem-loop sequence UAAGAGCAGUGGGCAUGGGAACAUAGGGGAAAGCCAAACUUUCUUUACCUGUACAACUAAGGGUGGAGAACUGGAGAUUAGUUUAGUGUUUCCCAAUGCCUUCCAUGCCUAUUGUUCUUA

Reference

1 PMID:19584097
"Clusters and superclusters of phased small RNAs in the developing inflorescence of rice";
Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH;
Genome Res. 19:1429-1440(2009).