ncRNA ID | zma-miR2118f |
Species | Zea mays |
Class | miRNA |
Genome position | chr10:117678415-117678534 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 10 - UUCCCAAUGCCUUCCAUGCCUA - 31 |
Stem-loop(if miRNA) |
                    -A   A      A  C     ---------          GUAC UAAGAGCAGUGGGCAUGGGA  CAU GGGGAA GC AAACU         UUCUUUACCU    A ||||||||||||||||||||  ||| |||||| || |||||         |||||||||| AUUCUUGUUAUCCGUACCUU  GUA CCCUUU UG UUUGA         AAGAGGUGGG    A                     CC   A      G  A     UUAGAGGUC          AAUC |
Stem-loop sequence | UAAGAGCAGUGGGCAUGGGAACAUAGGGGAAAGCCAAACUUUCUUUACCUGUACAACUAAGGGUGGAGAACUGGAGAUUAGUUUAGUGUUUCCCAAUGCCUUCCAUGCCUAUUGUUCUUA |
1 | PMID:19584097
"Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009). |