| ncRNA ID | zma-miR395c-5p |
| Species | Zea mays |
| Class | miRNA |
| Genome position | chr10:79171671-79171808 [-] |
| Reference genome | RefGen_v2 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 95 - GUUCCCUGCAAACACUUCACCA - 116 |
| Stem-loop(if miRNA) |
UCUUG UUCU C C G - - ------------C A CGG GUUGG C CUUGGAGUUCC U CAAACACUUCAC C AGCUAGG CAU GUGC C ||||| | ||||||||||| | |||||||||||| | ||||||| ||| |||| CGACC G GGAUCUCAAGG A GUUUGUGAAGUG G UCGAUCC GUA CACG C -GUAA UAUU U - G U A ACUAGUCUAUGUU A UUC |
| Stem-loop sequence | UCUUGGUUGGUUCUCCCUUGGAGUUCCCUGCAAACACUUCACCAGCUAGGCCAUAGUGCCGGCCCUUGCACAAUGUUGUAUCUGAUCACCUAGCUAGUGUGAAGUGUUUGGAGGAACUCUAGGUGUUAUCCAGCAAUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008660098.2 |
|
2.5 | PREDICTED: Zea mays ADPATP carrier protein 1 mitochondrial (LOC100274442), transcript variant X4, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_008660097.2 |
|
2.5 | PREDICTED: Zea mays ADPATP carrier protein 1 mitochondrial (LOC100274442), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020543563.1 |
|
2.5 | PREDICTED: Zea mays ADPATP carrier protein 1 mitochondrial (LOC100274442), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020543562.1 |
|
2.5 | PREDICTED: Zea mays ADPATP carrier protein 1 mitochondrial (LOC100274442), transcript variant X1, mRNA | NA | coding protein | psRNATarget |
| 1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |