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BaseInfo

ncRNA ID ath-miRf10288-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UAUGGUGUCGAUCGACACUG - NA
Stem-loop(if miRNA)                     -GA   GUA    UCGACACCGUCAUAU
UCCAGUGUCGAUCGACACUA   GGG   UCGA               U
||||||||||||||||||||   |||   ||||               G
AGGUCACAGCUAGCUGUGGU   CCC   GAGA               A
                    AUG   --U    AAAGAGUCUCUGCUG
Stem-loop sequence UCCAGUGUCGAUCGACACUAGAGGGGUAUCGAUCGACACCGUCAUAUUGAGUCGUCUCUGAGAAAAGAGUCCCGUAUGGUGUCGAUCGACACUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183308.1
ncRNA:20   GUCACAGCUAGCUGUGGUAU   1
  *||||||||||||||||||*
targets:1241   GAGUGUCGAUCGACACCAUC   1260

1.0 Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence NA coding protein psRNATarget
EF183309.1
ncRNA:20   GUCACAGCUAGCUGUGGUAU   1
  *||||||||||||||||||*
targets:1333   GAGUGUCGAUCGACACCAUC   1352

1.0 Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence NA coding protein psRNATarget
DQ069810.1
ncRNA:20   GUCACAGCUAGCUGUGGUAU   1
  ==|||||||||||||||||*
targets:210   UGGUGUCGAUCGACACCAUC   229

2.0 Arabidopsis thaliana At2g13270 mRNA, partial sequence NA coding protein psRNATarget