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BaseInfo

ncRNA ID	zma-miR395l-5p
Species	Zea mays
Class	miRNA
Genome position	chr10:79171396-79171476 [-]
Reference genome	RefGen_v2
Source	miRBase
Length	22
Mature sequence(if miRNA)	59 - GUUCCUUCCAAACACUUCACCA - 80
Stem-loop(if miRNA)	--       U             C    AG  CAUGCACAA   AGUUCCU CCAAACACUUCAC AGCU  GC         G   ||||||| ||||||||||||| ||||  ||         A   UCAAGGA GGUUUGUGAAGUG UCGG  UU         U UC       -             A    -A  ACACCCAAG
Stem-loop sequence	AGUUCCUUCCAAACACUUCACCAGCUAGGCCAUGCACAAGAUGAACCCACAUUAGGCUAGUGAAGUGUUUGGAGGAACUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008660098.2	ncRNA:22   ACCACUUCACAAACCUUCCUUG   1   **||||||||||||||=||||= targets:578   CCGUGAAGUGUUUGGAGGGAAU   599 Target Full Sequence	2.5	PREDICTED: Zea mays ADPATP carrier protein 1 mitochondrial (LOC100274442), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008660097.2	ncRNA:22   ACCACUUCACAAACCUUCCUUG   1   **||||||||||||||=||||= targets:817   CCGUGAAGUGUUUGGAGGGAAU   838 Target Full Sequence	2.5	PREDICTED: Zea mays ADPATP carrier protein 1 mitochondrial (LOC100274442), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020543563.1	ncRNA:22   ACCACUUCACAAACCUUCCUUG   1   **||||||||||||||=||||= targets:2911   CCGUGAAGUGUUUGGAGGGAAU   2932 Target Full Sequence	2.5	PREDICTED: Zea mays ADPATP carrier protein 1 mitochondrial (LOC100274442), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020543562.1	ncRNA:22   ACCACUUCACAAACCUUCCUUG   1   **||||||||||||||=||||= targets:2911   CCGUGAAGUGUUUGGAGGGAAU   2932 Target Full Sequence	2.5	PREDICTED: Zea mays ADPATP carrier protein 1 mitochondrial (LOC100274442), transcript variant X1, mRNA	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).