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BaseInfo

ncRNA ID	ath-miRf10287-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GUUCUCUCUCAUUCCCGAUCG - NA
Stem-loop(if miRNA)	AGA   AAAU    U    -G  GAGUAAUCGAUUCA AACGAUCGGGAAUGAGAGAGAACACUGCAAAUUAG   UCC    UCAA GGAU  GA              G |||||||||||||||||||||||||||||||||||   |||    |||| ||||  || UUGCUAGCCCUUACUCUCUCUUGUGACGUUUAAUU   GGG    AGUU CGAG  UG              C                                    --G   -AAU    A    AA  GUUAAUGCUAGGUU
Stem-loop sequence	AACGAUCGGGAAUGAGAGAGAACACUGCAAAUUAGAGAUCCAAAUUCAAUGGAUGGAGAGUAAUCGAUUCAGCUUGGAUCGUAAUUGGUAAGAGCAUUGAUAAGGGGUUAAUUUGCAGUGUUCUCUCUCAUUCCCGAUCGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_100876.4	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   ||*||||||=||||||||||| targets:1049   CGUUCGGGAGUGAGAGAGAAC   1069 Target Full Sequence	2.5	Arabidopsis thaliana formin-like protein (DUF1005) mRNA	formin-like protein (DUF1005)(AT1G10020)	coding protein	psRNATarget
AK229103.1	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   ||*||||||=||||||||||| targets:904   CGUUCGGGAGUGAGAGAGAAC   924 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-38-J16	NA	coding protein	psRNATarget
BX813941.1	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   ||*||||||=||||||||||| targets:903   CGUUCGGGAGUGAGAGAGAAC   923 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX815513.1	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   ||*||||||=||||||||||| targets:873   CGUUCGGGAGUGAGAGAGAAC   893 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX815131.1	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   ||*||||||=||||||||||| targets:910   CGUUCGGGAGUGAGAGAGAAC   930 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS36ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT011247.1	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   ||*||||||=||||||||||| targets:804   CGUUCGGGAGUGAGAGAGAAC   824 Target Full Sequence	2.5	Arabidopsis thaliana At1g10020 mRNA, complete cds	NA	coding protein	psRNATarget
BT012548.1	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   ||*||||||=||||||||||| targets:671   CGUUCGGGAGUGAGAGAGAAC   691 Target Full Sequence	2.5	Arabidopsis thaliana At1g10020 gene, complete cds	NA	coding protein	psRNATarget
BX813405.1	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   ||*||||||*||||||||||| targets:861   CGUUCGGGAUUGAGAGAGAAC   881 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_125351.3	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   **||=|*|||||||||||||= targets:61   AUAUUGAGAAUGAGAGAGAAU   81 Target Full Sequence	3.0	Arabidopsis thaliana UDP-glucosyl transferase 76E2 (UGT76E2), mRNA	UDP-glucosyl transferase 76E2(UGT76E2)	coding protein	psRNATarget
BT004159.1	ncRNA:21   GCUAGCCCUUACUCUCUCUUG   1   **||=|*|||||||||||||= targets:22   AUAUUGAGAAUGAGAGAGAAU   42 Target Full Sequence	3.0	Arabidopsis thaliana clone RAFL16-04-E16 (R50114) putative glucuronosyl transferase (At5g59590) mRNA, complete cds	NA	coding protein	psRNATarget