ncRNA ID | zma-miR167d-3p |
Species | Zea mays |
Class | miRNA |
Genome position | chr1:287728642-287728774 [-] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 19 - GGUCAUGCUGCUGCAGCCUCACU - 41 |
Stem-loop(if miRNA) |
U      ----     C      A     --              UCUGA         CGAAAA     A  GCCCAA    GGGAA GAGUGA GCUGC  CAGCAUGAUCUAGC     GUGAUCACC      AGAAC A  ||||||    ||||| |||||| |||||  ||||||||||||||     |||||||||      |||||  CGGGUU    CCCUU UUCACU CGACG  GUCGUACUGGAUCG     UACUGGUGG      UCUUG U A      GCUG     C      C     UC              UUCCG         -----A     A |
Stem-loop sequence | UGCCCAAGGGAACGAGUGAAGCUGCCAGCAUGAUCUAGCUCUGAGUGAUCACCCGAAAAAGAACAAUAGUUCUAGGUGGUCAUGCCUUGCUAGGUCAUGCUGCUGCAGCCUCACUUCUUCCCGUCGUUGGGCA |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |