Search result

BaseInfo

ncRNA ID zma-miR167d-3p
Species Zea mays
Class miRNA
Genome position chr1:287728642-287728774 [-]
Reference genome RefGen_v2
Source miRBase
Length 23
Mature sequence(if miRNA) 19 - GGUCAUGCUGCUGCAGCCUCACU - 41
Stem-loop(if miRNA) U      ----     C      A     --              UCUGA         CGAAAA     A
 GCCCAA    GGGAA GAGUGA GCUGC  CAGCAUGAUCUAGC     GUGAUCACC      AGAAC A
 ||||||    ||||| |||||| |||||  ||||||||||||||     |||||||||      |||||
 CGGGUU    CCCUU UUCACU CGACG  GUCGUACUGGAUCG     UACUGGUGG      UCUUG U
A      GCUG     C      C     UC              UUCCG         -----A     A
Stem-loop sequence UGCCCAAGGGAACGAGUGAAGCUGCCAGCAUGAUCUAGCUCUGAGUGAUCACCCGAAAAAGAACAAUAGUUCUAGGUGGUCAUGCCUUGCUAGGUCAUGCUGCUGCAGCCUCACUUCUUCCCGUCGUUGGGCA

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).