ncRNA ID | zma-miR171i-5p |
Species | Zea mays |
Class | miRNA |
Genome position | chr1:273293188-273293291 [+] |
Reference genome | RefGen_v2 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 23 - UGUUGGCACGGUUCAAUCAAA - 43 |
Stem-loop(if miRNA) |
CUGGUU    -     -AG  C                      ---A   -  G       GGCU GAGAG   UG GAUGUUGGCACGGUUCAAUCAA    UCG CC G       |||| |||||   || ||||||||||||||||||||||    ||| || C       CCGA CUCUU   AC CUAUAACCGUGCCGAGUUAGUU    AGU GG C ---GAU    U     CCA  A                      GUUC   U  G |
Stem-loop sequence | CUGGUUGGCUGAGAGAGUGCGAUGUUGGCACGGUUCAAUCAAAUCGCCGGCCGGGUUGACUUGUUGAUUGAGCCGUGCCAAUAUCACAACCUUCUCUAGCCUAG |
1 | PMID:19936050
"A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009). |