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BaseInfo

ncRNA ID zma-miR171l-5p
Species Zea mays
Class miRNA
Genome position chr1:245903464-245903541 [+]
Reference genome RefGen_v2
Source miRBase
Length 21
Mature sequence(if miRNA) 2 - UAUUGGCGUGCCUCAAUCCGA - 22
Stem-loop(if miRNA) --           C          AG         A   
  GUAUUGGCGUG CUCAAUCCGA  GCGUGGCUG CUGG
  ||||||||||| ||||||||||  ||||||||| |||C
  UAUAACUGCGC GAGUUAGGUU  UGUACCGAC GGCG
UC           C          CU         -   
Stem-loop sequence GUAUUGGCGUGCCUCAAUCCGAAGGCGUGGCUGACUGGCGCGGCAGCCAUGUUCUUGGAUUGAGCCGCGUCAAUAUCU

Reference

1 PMID:19936050
"A genome-wide characterization of microRNA genes in maize";
Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D;
PLoS Genet. 5:e1000716(2009).