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BaseInfo

ncRNA ID	zma-miR166i-5p
Species	Zea mays
Class	miRNA
Genome position	chr1:241298238-241298320 [+]
Reference genome	RefGen_v2
Source	miRBase
Length	21
Mature sequence(if miRNA)	3 - GGAAUGUCGUCUGGCGCGAGA - 23
Stem-loop(if miRNA)	UC      - G         A  A      GUGC GGGGAAUG  GUCUGG C CGAGACCGU CC GACGAC    U ||||||||  |||||| | ||||||||| || ||||||    C CCCCUUAC  CGGACC G GCUCUGGCA GG CUGCUG    U         UU      A -         -  -      GCUC
Stem-loop sequence	GGGGAAUGUCGUCUGGCGCGAGACCGUACCAGACGACGUGCUCUCUCGGUCGUCGGACGGUCUCGGACCAGGCUUCAUUCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235071.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   ||||||||||||||||||||| targets:71   UCUCGCGCCAGACGACAUUCC   91 Target Full Sequence	0.0	Sequence 1066 from Patent EP2985353	NA	coding protein	psRNATarget
JB163402.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   ||||||||||||||||||||| targets:71   UCUCGCGCCAGACGACAUUCC   91 Target Full Sequence	0.0	Sequence 1066 from Patent EP2559767	NA	coding protein	psRNATarget
HI402941.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   ||||||||||||||||||||| targets:71   UCUCGCGCCAGACGACAUUCC   91 Target Full Sequence	0.0	Sequence 1066 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235370.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   ||||||||||||||||||||| targets:71   UCUCGCGCCAGACGACAUUCC   91 Target Full Sequence	0.0	Sequence 1365 from Patent EP2985353	NA	coding protein	psRNATarget
JB163701.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   ||||||||||||||||||||| targets:71   UCUCGCGCCAGACGACAUUCC   91 Target Full Sequence	0.0	Sequence 1365 from Patent EP2559767	NA	coding protein	psRNATarget
HI403240.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   ||||||||||||||||||||| targets:71   UCUCGCGCCAGACGACAUUCC   91 Target Full Sequence	0.0	Sequence 1365 from Patent EP2074227	NA	coding protein	psRNATarget
HI403108.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 1233 from Patent EP2074227	NA	coding protein	psRNATarget
HI403410.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 1535 from Patent EP2074227	NA	coding protein	psRNATarget
HI408663.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 6788 from Patent EP2074227	NA	coding protein	psRNATarget
JB169124.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 6788 from Patent EP2559767	NA	coding protein	psRNATarget
JB163569.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 1233 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240793.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 6788 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235540.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 1535 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235238.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 1233 from Patent EP2985353	NA	coding protein	psRNATarget
JB163871.1	ncRNA:21   AGAGCGCGGUCUGCUGUAAGG   1   *||||*|||||||*||||||| targets:75   CCUCGAGCCAGACAACAUUCC   95 Target Full Sequence	2.5	Sequence 1535 from Patent EP2559767	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).