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BaseInfo

ncRNA ID	zma-miR482-5p
Species	Zea mays
Class	miRNA
Genome position	chr1:157982827-157982948 [+]
Reference genome	RefGen_v2
Source	miRBase
Length	19
Mature sequence(if miRNA)	3 - UGGGAGAUGAAGGAGCCUU - 21
Stem-loop(if miRNA)	--        - UG      CCUU  --AU   --U   --ACC  -  GAGGAGCGCUCGCCUUC   AGUGGGAG A  AAGGAG    GC    CGA   GUC     GC CG                 U   |||||||| |  ||||||    ||    |||   |||     || ||   UUACCCUC U  UUCCUU    CG    GCU   CAG     CG CG                 U UU        C UG      --CU  CUCC   CCC   GCUCC  C  AUAACGCCGCCACGCGC
Stem-loop sequence	AGUGGGAGAUGAAGGAGCCUUGCAUCGAUGUCACCGCCGGAGGAGCGCUCGCCUUCUUCGCGCACCGCCGCAAUAGCCGCCCUCGGACCCCUCGCCUCGCUCUUCCUUGUUCCUCCCAUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539240.1	ncRNA:19   UUCCGAGGAAGUAGAGGGU   1   |*|||*||||||||||||| targets:389   ACGGCACCUUCAUCUCCCA   407 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized mitochondrial protein AtMg00810-like (LOC109940146), partial mRNA	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).