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BaseInfo

ncRNA ID	zma-miR171h-3p
Species	Zea mays
Class	miRNA
Genome position	chr1:152260190-152260313 [+]
Reference genome	RefGen_v2
Source	miRBase
Length	21
Mature sequence(if miRNA)	85 - GUGAGCCGAACCAAUAUCACU - 105
Stem-loop(if miRNA)	-     GA     ACG      C         U             CUUCUU  A        UG  GGGAG  AGGAG   ACAUGG GUGGUAUUG UUCGGCUCAUGUC      CG UCGAGUCU  C  |||||  |||||   |||||| ||||||||| |||||||||||||      || ||||||||  C  CCCUU  UUCUC   UGUACU CACUAUAAC AAGCCGAGUGUAG      GU GGUUUAGG  G A     AC     --A      -         C             -----U  A        UU
Stem-loop sequence	GGGAGGAAGGAGACGACAUGGCGUGGUAUUGUUUCGGCUCAUGUCCUUCUUCGAUCGAGUCUUGCCGUUGGAUUUGGAUGUGAUGUGAGCCGAACCAAUAUCACUCAUGUACUCUUCAUUCCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008655719.2	ncRNA:21   UCACUAUAACCAAGCCGAGUG   1   =|||||||||||||||||||* targets:758   GGUGAUAUUGGUUCGGCUCAA   778 Target Full Sequence	1.0	PREDICTED: Zea mays nodulation-signaling pathway 2 protein (LOC103634103), mRNA	NA	coding protein	psRNATarget

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).