Search result

BaseInfo

ncRNA ID	zma-miR171h-5p
Species	Zea mays
Class	miRNA
Genome position	chr1:152260190-152260313 [+]
Reference genome	RefGen_v2
Source	miRBase
Length	21
Mature sequence(if miRNA)	24 - UGGUAUUGUUUCGGCUCAUGU - 44
Stem-loop(if miRNA)	-     GA     ACG      C         U             CUUCUU  A        UG  GGGAG  AGGAG   ACAUGG GUGGUAUUG UUCGGCUCAUGUC      CG UCGAGUCU  C  |||||  |||||   |||||| ||||||||| |||||||||||||      || ||||||||  C  CCCUU  UUCUC   UGUACU CACUAUAAC AAGCCGAGUGUAG      GU GGUUUAGG  G A     AC     --A      -         C             -----U  A        UU
Stem-loop sequence	GGGAGGAAGGAGACGACAUGGCGUGGUAUUGUUUCGGCUCAUGUCCUUCUUCGAUCGAGUCUUGCCGUUGGAUUUGGAUGUGAUGUGAGCCGAACCAAUAUCACUCAUGUACUCUUCAUUCCCA

Reference

1	PMID:19936050 "A genome-wide characterization of microRNA genes in maize"; Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D; PLoS Genet. 5:e1000716(2009).