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BaseInfo

ncRNA ID	vvi-miR3626-3p
Species	Vitis vinifera
Class	miRNA
Genome position	NA
Reference genome	NA
Source	miRBase
Length	21
Mature sequence(if miRNA)	NA - CUUCAAUUUCACAGCGACCAC - NA
Stem-loop(if miRNA)	A                               A   C GCCUUCACCGGU GUCGCUGUGAAAUUGAAGUAUAGUUUGCGCU UUC A |||||||||||| ||||||||||||||||||||||||||||||| ||| CGGAAGUGGUCA CAGCGACACUUUAACUUCAUAUCAAACGUGA AGG A             C                               C   U
Stem-loop sequence	GCCUUCACCGGUAGUCGCUGUGAAAUUGAAGUAUAGUUUGCGCUAUUCCAAUGGACAGUGCAAACUAUACUUCAAUUUCACAGCGACCACUGGUGAAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA169120.1	ncRNA:21   CACCAGCGACACUUUAACUUC   1   ||||||||||||||||||||| targets:773   GUGGUCGCUGUGAAAUUGAAG   793 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_696_Transcript_12/12_Confidence_0.278.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA169121.1	ncRNA:21   CACCAGCGACACUUUAACUUC   1   ||||||||||||||||||||| targets:1757   GUGGUCGCUGUGAAAUUGAAG   1777 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_696_Transcript_4/12_Confidence_0.278.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA149332.1	ncRNA:21   CACCAGCGACACUUUAACUUC   1   *||||=|||*||||||||||| targets:1164   UUGGUUGCUAUGAAAUUGAAG   1184 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12015_Transcript_3/6_Confidence_0.533.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA149333.1	ncRNA:21   CACCAGCGACACUUUAACUUC   1   *||||=|||*||||||||||| targets:1225   UUGGUUGCUAUGAAAUUGAAG   1245 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12015_Transcript_4/6_Confidence_0.533.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA143107.1	ncRNA:21   CACCAGCGACACUUUAACUUC   1   *||||=||||*|||||||||| targets:3   UUGGUUGCUGAGAAAUUGAAG   23 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_32346_Transcript_2/5_Confidence_0.524.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_019219019.1	ncRNA:21   CACCAGCGACACUUUAACUUC   1   **||||*||||||||||*||| targets:162   AGGGUCCCUGUGAAAUUAAAG   182 Target Full Sequence	2.5	PREDICTED: Vitis vinifera alpha-L-fucosidase 2 (LOC100266190), transcript variant X2, mRNA	NA	coding protein	psRNATarget

Reference

1	PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010).